早稲田大学竹山研究室と合同ワークショップを行いました。

Takeyama Lab & Ogata Lab Workshop

Venue: Bioinformatics Center, Institute of Chemical Research, Kyoto University

July 25th (Tuesday)

14:00-15:00 Seminar by Prof. Shinichi Sunagawa; The ocean microbiome as a treasure trove for novel taxa, enzymes and bioactive compounds
15:30-15:40 Opening talk by Prof. Takeyama

15:40-17:20 Session 1, Chair: Ryota Wagatsuma & Yuto Hiraki
Ruixuan Zhang; Translation landscape of a giant virus
Jingjie Chen; Transcriptome of virophage reflects its infection to APMV
Hongda Zhao; Endogenous giant virus in eukaryotic genomes
Naoya Iwai; Target enrichment of uncultured human oral bacteria with phage-derived molecules found by single-cell genomics
Mika Nishimura; Development of highly sensitive bacterial scRNA-seq technology
Kana Jitsuno; Comparative single-cell genomics of Atribacterota JS1 in the Japan Trench hadal sedimentary biosphere

18:00 Party, Kihada

July 26th (Wednesday)

10:30-11:40 Session 2, Chair: Ruixuan Zhang & Jingjie Chen
Yuto Hiraki; Development for monitoring marine bioresources by combining environmental DNA method and passive acoustic technique
Ryota Wagatsuma; Droplet-based single-virus-genomics to analyze environmental viruses
Junyi Wu; Re-evaluating evolution in Nucleocytoviricota: the hidden impact of Virus-to-Virus gene transfer
Hiroki Ban; Global distribution of Parmales, the tiny sister to diatom, from pole to pole
13:00-14:00; Visit for supercomputer & wet lab
14:00-15:30

Session 3, Chair: Ruixuan Zhang & Ryota Wagatsuma
Qingwei Yang; Characterization of sinking and suspended micro-eukaryotic communities in spring Oyashio waters
Wenwen Liu; Towards an understanding of the ecology and evolution of giant viruses in mesopelagic layer
Komei Nagasaka; Identification of deep-sea adaptation genes in giant viruses
Yuki Ohnishi; Genome analysis of root endophytic bacteria in soybean to elucidate the function of rare actinomycetes
Chika So; Rhizobial infection-specific transcriptome analysis in soybeans root hairs
Masako Kifushi; Genome-based functional analysis of root-associated microbial consortia for soybean growth promotion

15:30-16:00; Free discussion
16:00 Ending talk by Prof. Ogata